Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015884698.1_cds_XP_016438918.1_34531
CDS Infomation

[gene=LOC107764844] [db_xref=GeneID:107764844] [protein=protein MEI2-like 2 isoform X2] [protein_id=XP_016438918.1] [location=join(21171..21182,21296..21410,21492..21958,22183..22341,22427..22543,22649..22800,23213..23304,23385..24318,24406..24490,24578..24646,24886..25065,25237..25350)] [gbkey=CDS]
Sequence

ATGGCTCTGAAGACTTCTGGTATAGAGAGGAATGCTTGGGAAATCCCCCTTGGAACAGCT
GCACATCATGCATCAACTGATGCAAGCTTGTTTTCTAGTTCACTGCCTGTTCTGCCACAT
GCAAAATTAAACTTTGCTGAATCTGAGAACTATGGTCAATCCATTGATGATAGCTCACCC
AGCTTAAGCAGACTTCATTTAGAAGATGAAATGAAAGATCCACTGGAAGAGGAACTAAGT
CAAGATCGCTGTTTGCTCCCTGGGGATGAAGATGAGCTACTAGCAGGCATCATGGATGAT
TTTGATCTTAGCGGGTTGCCAACTCAGGTGGAGGACTTGGAAGATGATTTTTTTGGCAGT
GGTGGAGGACTAGAATTGGAACCTGACGCTCCTCAGGATAGCTCACTTAATGGTTTTGCA
AAGTTAAGCTTGTCTGATGGTATTCTTGGAAGTAGTGTTGGACATTATATCTTCCCCAAC
GGTGCTGGAACTGTTGTCGGAGAACACCCATATGGAGAGCATCCTTCTAGGACATTGTTT
GTTCGGAATATTAACAGCAACGTAGAGGACTCCGAGCTACAATCTCTCTTTGAGCAATAT
GGTGATATCAGAACTTTGTATACTGCATGCAAGCATAGGGGCTTTGTGATGATATCTTAC
TATGATATCCGAGCTGCTCGAACTGCAATGCGCGCACTACAAAATAAGCCTCTAAGACGG
AGAAAGCTAGACATTCATTTTTCAATCCCTAAGGAAAATCCATCAGAGAAAGATATTAAC
CAAGGAACGCTGGTCATTTTCAACTTGGATCCTTCAGTATCCAATGAGGATCTCTGCCAA
ATATTTGGGGCTTATGGGGAAGTGAAAGAGATCAGGGAAACACCGCACAAGCGCCATCAT
AAATTCATTGAGTTTTACGATGTTAGAGCAGCTGAGGCTGCACTCAAGGCTTTAAATAGG
AGTGACATAGCTGGTAAGCGGATAAAGCTTGAACCGAGCCGGCCTGGTGGAGCCCGTCGA
AACTTGATGCAGCAACTTGGTCAGGACTATGAACATGAAGAAGTTCGAACTTTTAGGCAC
TCAGTTGGTTCTCCAGTAGCCAGCTCTCCTCCAGGTAGCTGGTCAAACTTTGGCAGTCCT
GTTGAGCCCAACTCATTGCTTGGTTATAATCAATCGCCTGGTCTGAGAAATCTCAGCCCT
GTGAATGGCAATCATATGCCAGGGCTGGCTTCTATTCTTCCAGGCCATTTGTCAAGTCCT
AAGATCGCACCAATTGGTAAAGATCCACGACGACTTGGCCATCTGAATCAGGCAATTACT
AGTCCCAAGTCAGTGCAAGGAGTGGGTTATCAGCATTCTCATTCAGTTCCTGAGCATATA
CCACGTTTGAACATGGGATCTATGTCGTTTGGTGAGTCTAAGTCGTCCGGGATTGGGATG
CTTTCTGGTCCACAATTTCTTTGGGGAAGTCCCCCCATACAGTCGGAGCATACTGACTCG
TCTGTCTGGTCAACTTCATCAATGACACATCCATTTGCATCAAATGGGCAAGGGCAAGGG
CATGGCTATCCATATCCTCGTCGGCAGGGCTTGTTCCTCGGAAAACATCATGTGGGATCT
GCTCCATCAGGAATTCCTCTGGATAGGCATTTAGGTCTTTTCTCTGAGTCTCCTGAAACA
TCATATATGCACCAAGTTGCATATGGTAGTCCAGGTTCTAGTCACAACAATGGAAGTCGT
GTCATGAGTATAGGTAGCCTTGGGGCAATGAACATGGGTGTTTCTCTTGCTGGGAACTTT
CCTGAAAGTGGTTCTCCTAGCCCTAGAATGACGCCACTGGCTAGGAACGGGCATTTATTT
TTCGGAAATGGCTCTTACAGAGGAATAGGAATGGCTAACAGTGAAGGGCTAACAGAACGA
GGTCGAAGTCGAGGAGTTGAGACTGGAAATGAGATAGACAACAAAAAACAATATCAGCTT
GATTTGAAGAAGATCATGAGTGGAGAAGATAGTAGGACAACTTTAATGATTAAAAACATC
CCAAACAAGTACACCTCAAAGATGCTACTCACAGCAATTGACGAGACTCATAAGAATACA
TATGATTTCCTCTACTTGCCTATTGATTTCAAGAACAAATGCAACGTTGGTTATGCCTTC
ATCAACATGGTGTCTCCTTCAAATATCATCTCCTTTTATGAGGTATTCAATGGGAAGAAG
TGGGAAAAGTTTAACAGTGAAAAGGTTGCTTCCTTGGCTTATGCACGTATCCAAGGGAAG
GCAGCCTTGGTTGCTCATTTCCAGAACTCAAGCTTAATGAATGAAGACAAGCGGTGCCGC
CCAATTCTTTTCCAGTCAGAGGGCCAAGAAGCAGCTGACCAGGAACCGTTGCCATCCAAC
AATCTGAACATTTGCGTACGTCGTCCTGATGGGTCCTACTTTGGAGATTCTCTGGATAGT
CCAAAGGGTGATTTAGATGACAACCCTGAGAATTAA

Peptide Sequence

PEP ID

XP_016438918.1
PEP Infomation

PREDICTED: protein MEI2-like 2 isoform X2 [Nicotiana tabacum]
Sequence

MALKTSGIERNAWEIPLGTAAHHASTDASLFSSSLPVLPHAKLNFAESENYGQSIDDSSP
SLSRLHLEDEMKDPLEEELSQDRCLLPGDEDELLAGIMDDFDLSGLPTQVEDLEDDFFGS
GGGLELEPDAPQDSSLNGFAKLSLSDGILGSSVGHYIFPNGAGTVVGEHPYGEHPSRTLF
VRNINSNVEDSELQSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRR
RKLDIHFSIPKENPSEKDINQGTLVIFNLDPSVSNEDLCQIFGAYGEVKEIRETPHKRHH
KFIEFYDVRAAEAALKALNRSDIAGKRIKLEPSRPGGARRNLMQQLGQDYEHEEVRTFRH
SVGSPVASSPPGSWSNFGSPVEPNSLLGYNQSPGLRNLSPVNGNHMPGLASILPGHLSSP
KIAPIGKDPRRLGHLNQAITSPKSVQGVGYQHSHSVPEHIPRLNMGSMSFGESKSSGIGM
LSGPQFLWGSPPIQSEHTDSSVWSTSSMTHPFASNGQGQGHGYPYPRRQGLFLGKHHVGS
APSGIPLDRHLGLFSESPETSYMHQVAYGSPGSSHNNGSRVMSIGSLGAMNMGVSLAGNF
PESGSPSPRMTPLARNGHLFFGNGSYRGIGMANSEGLTERGRSRGVETGNEIDNKKQYQL
DLKKIMSGEDSRTTLMIKNIPNKYTSKMLLTAIDETHKNTYDFLYLPIDFKNKCNVGYAF
INMVSPSNIISFYEVFNGKKWEKFNSEKVASLAYARIQGKAALVAHFQNSSLMNEDKRCR
PILFQSEGQEAADQEPLPSNNLNICVRRPDGSYFGDSLDSPKGDLDDNPEN

Transcript Sequence

Gene sequence data has not been registered.